Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015803187.1_cds_XP_016483237.1_7423
CDS Infomation

[gene=LOC107803946] [db_xref=GeneID:107803946] [protein=SPX and EXS domain-containing protein 1-like] [protein_id=XP_016483237.1] [location=join(6964..7045,7152..7285,13563..13601,13690..13782,13869..13988,14773..14868,15379..15492,16186..16239,17538..17585,18443..18593,19285..19450,21723..21792,22044..22301)] [gbkey=CDS]
Sequence

ATGTTTGGGAGTCTTGTGGATGCTCCTGCCAACAGTCCACATCTACGGAGGTCTGGAAGC
CGAGCAGTTGTATCTGATATTGGTGTTATTGAGCTTGGAGGAAGTCCTGAAGAATCCCTT
TTGCATAGTATAGAGGTCGATGAAATGAAGGGTGTGACGACACCATTGAGCAGTGCGGCC
ATAATGCCATCTCCTGTTCTTTTATGGAGGTTTAAGGTACTTCTGTTCCTCATTTGGGGT
GTCAGTTGTTGCAAGATTGGCTGGGATTCAGTCATGAGAATGAGCGTAAACCTTCGTGAT
CTATTCTTATACGAGGCTTTTCTTTATTACAATCCTCTTCTTCTTGTGACCATGATGGTT
TGGTTTTGGGGAATAAACCTATGGGTTTTCGCGCAGGCTAATGTCAACTATGCTAAAATT
TTTGATCTTGATCAGAATCATCATCTCTCTCACAGAGAGATTTGGAAGTGTGCTACTTGG
ATGACGATCATTGTGCCGACAAGCATGACGGCCTATCTCTATCTCTATTCACATGGAGAA
GTTTCATTGGCTGCATCTCAACCAGTGCTTCTATATGCTGGGTTTGCCATGGCTCTGATA
TTTCCATTTGATATATTCTTTTTGTCATCTCGCTACTTTTTGTTAAGGACGCTTTGGCGG
ATAGTTTTCCCGTTACAGGCTATATCATTTGCTGACTTCTTTCTGGCTGATATATTGACT
TCTATGTCAAAGGTATTTTCGGATTTGGAACGTTCCGTCTGTAGAATGGTTCATCGACAG
GTTGCTACCATTGCATGGTTTGAAGCTGATTCTGTTTGTGGAAGTCATGCTGTTGCAATT
CCCATTGTTCTTGTATTGCCTTATCTATTCCGTCTCTTTCAATGTCTTCGGCAATATAAG
GATACCAGAGAGAAGACTACCCTGTTGAATGCCTTAAAATATTCAACTGCAGTACCTGTG
ATATATCTCTCAGCCCTTAAGTATCACGTCTTCCCTGACAACTGGGTTAATATTTATCGG
CCTTTATGGCTTCTATCCGGTGTGGTGAACTCTCTCTACTCATTCTATTGGGATCTGACA
AGAGATTGGGACTTGAGTTGCTTCACTCGGATTTTCAAGTTCAGCAGACCGAATGCATTA
TCACACTTGTTATATGGGCGGAAATGGGTCTACTTTTGGGTGATTGGAAGCAACCTCATC
CTGCGATGCACGTGGACATACAAGCTGTCTGCCCATCTCCGGCACAATTATCTCACCGTG
TTTGCAATAACTGCGCTTGAGATCTTCCGTCGCTTCCAGTGGGCTTTCTTCCGTGTAGAG
AACGAGTGGAATAAAACAAACTCTAAACCAAATATTCAACTCTCCACGAGTGACAAGCCA
ACTGATGAACAAAAATTACTCGACCCAAACGGTCACAGTGTGTAG

Peptide Sequence

PEP ID

XP_016483237.1
PEP Infomation

PREDICTED: SPX and EXS domain-containing protein 1-like [Nicotiana tabacum]
Sequence

MFGSLVDAPANSPHLRRSGSRAVVSDIGVIELGGSPEESLLHSIEVDEMKGVTTPLSSAA
IMPSPVLLWRFKVLLFLIWGVSCCKIGWDSVMRMSVNLRDLFLYEAFLYYNPLLLVTMMV
WFWGINLWVFAQANVNYAKIFDLDQNHHLSHREIWKCATWMTIIVPTSMTAYLYLYSHGE
VSLAASQPVLLYAGFAMALIFPFDIFFLSSRYFLLRTLWRIVFPLQAISFADFFLADILT
SMSKVFSDLERSVCRMVHRQVATIAWFEADSVCGSHAVAIPIVLVLPYLFRLFQCLRQYK
DTREKTTLLNALKYSTAVPVIYLSALKYHVFPDNWVNIYRPLWLLSGVVNSLYSFYWDLT
RDWDLSCFTRIFKFSRPNALSHLLYGRKWVYFWVIGSNLILRCTWTYKLSAHLRHNYLTV
FAITALEIFRRFQWAFFRVENEWNKTNSKPNIQLSTSDKPTDEQKLLDPNGHSV

Transcript Sequence

Gene sequence data has not been registered.